BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A11LP1|AL428153
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1631 1515 0.0
>3x_Contig1631
Length = 12284
Score = 1515 bits (761), Expect = 0.0
Identities = 861/883 (97%), Gaps = 11/883 (1%)
Strand = Plus / Plus
Query: 1 gatcttgagcagttacggctccagcattccaaactttgaacagtatactgccaactggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4798 gatcttgagcagttacggctccagcattccaaactttgaacagtatactgccaactggtt 4857
Query: 61 gaagastttccccgttatccacgatgaagaatgtkccgcgtatcaattatagaatgtatg 120
||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 4858 gaagactttccccgttatccacgatgaagaatgtgccgcgt-tcaattatagaatgt-tg 4915
Query: 121 gtcacaattgatagaccacaattcgcctgttattgcaaggtaacacagccgaaatcgttg 180
| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 4916 g-cacaattgatagaccacaattcgcctgtgatt-caaggtaacacagccgaaatcgttg 4973
Query: 181 attatgtaatacaagccttacatcaaaagtctatcggtggaaaaaatgctactgctgtgg 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4974 attatgtgatacaagccttacatcaaaagtctatcggtggaaaaaatgctactgctgtgg 5033
Query: 241 tagaatctggcaaaaaaactactaagtactatcccacaggaacaagcatctgctctactt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5034 tagaatctg-caaaaaaactactaagtactatcccacaggaacaagcatctgctctactt 5092
Query: 301 caatcgatacccaccggaaatcatgcaaaccatacacaaatggttcgcttgaattatgat 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5093 caa-cgatacccaccggaaatcatgcaaaccatacacaaatggttcgcttgaattatgat 5151
Query: 361 tcgtgggtttaatttcgccaaggccaattatcagatatatgtacatgtttagccctctat 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5152 tcgtgggtttaatttc-ccaaggccaattatcagatatatgtacatgtttagccctctat 5210
Query: 421 actgatttttatgaattagcatatgagtgttcttatactgcatagacatttctagcttat 480
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 5211 actgatttttatgaattagcatatgagtcttcttatactgcatagacatttcta-cttat 5269
Query: 481 tgaacggaatagattcaagcttgtatcagttttgctatactatgcgacccgcgctggcac 540
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 5270 tgaacggaatagattcaagcttgtatcagttttgctatactatgcaacccgc-ctggcac 5328
Query: 541 catacaatttccattatyattattcttaatagagaactctttttttctttttcttgarat 600
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5329 ca-acaatttccattatcattattcttaatagagaactctttttttctttttcttgaaat 5387
Query: 601 cctgtgaagaaaaaaatactgaaaagaattgttaaagcgatgagatgagatgagatgaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5388 cctgtgaagaaaaaaatactgaaaagaattgttaaagcgatgagatgagatgagatgaaa 5447
Query: 661 tgagactgaaagtatttgatagcaaaaagattcattgtgaactgtccccatttggcagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5448 tgagactgaaagtatttgatagcaaaaagattcattgtgaactgtccccatttggcagag 5507
Query: 721 cacacttttcattatcataatataaatacattattcagtaatttcaagatgggtttggca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5508 cacacttttcattatcataatataaatacattattcagtaatttcaagatgggtttggca 5567
Query: 781 gcmgctaggaataaacaaaggtttggattggatccaagaaacacaacttggagttacaat 840
|| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5568 gcagcaaggaataaacaaaggtttggattggatccaagaaacacaacttggagtaacaat 5627
Query: 841 acatcaagatttkggacacaaacatctagagaaactaggatgg 883
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5628 acatcaagattt-ggacacaaacatctagagaaactaggatgg 5669
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8473
Number of Sequences: 1807
Number of extensions: 8473
Number of successful extensions: 518
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)